STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpp5Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family. (574 aa)    
Predicted Functional Partners:
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.693
ENSCVAP00000010644
Uncharacterized protein.
    
 0.693
ENSCVAP00000017638
Uncharacterized protein.
    
 0.693
ENSCVAP00000026852
Uncharacterized protein.
    
 0.693
LOC107089879
Angiomotin.
    
 
 0.677
LOC107098486
Uncharacterized protein.
    
 0.664
crb1
Crumbs cell polarity complex component 1.
    
 0.664
LOC107102263
Crumbs cell polarity complex component 2b.
    
 0.664
ENSCVAP00000024330
Uncharacterized protein.
    
 0.664
LOC107091323
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
0.575
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.