STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000002288Uncharacterized protein. (109 aa)    
Predicted Functional Partners:
LOC107087156
Fibronectin type-III domain-containing protein.
   
 0.981
LOC107082650
ALG13 UDP-N-acetylglucosaminyltransferase subunit.
   
 0.791
LOC107084171
Fibronectin type-III domain-containing protein.
   
 0.791
alg13
Zgc:92907.
   
 0.791
il10
Interleukin 10.
   
  
 0.650
cd8a
Uncharacterized protein.
      
 0.622
LOC107103272
Uncharacterized protein.
      
 0.612
ENSCVAP00000017074
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
   
  
 0.605
LOC107099476
Interleukin-1.
   
  
 0.583
ENSCVAP00000030880
Uncharacterized protein.
   
  
 0.557
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.