STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec14l2SEC14-like lipid binding 8. (419 aa)    
Predicted Functional Partners:
ttc39b
Tetratricopeptide repeat domain 39B.
      
 0.627
LOC107094403
Uncharacterized protein.
      
 0.499
ENSCVAP00000021265
BSCL2 lipid droplet biogenesis associated, seipin.
      
 0.493
faxdc2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
    
 
 0.493
dgat2
Diacylglycerol O-acyltransferase 2.
   
 
 0.491
tfap2e
Transcription factor AP-2 epsilon.
      
 0.489
sumf1
Sulfatase modifying factor 1.
    
 0.449
dhrs11
Dehydrogenase/reductase (SDR family) member 11a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.410
LOC107090012
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.410
LOC107090028
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.410
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.