STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107081982TNNI3 interacting kinase. (813 aa)    
Predicted Functional Partners:
tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
  
 0.703
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.659
cd247
Uncharacterized protein.
   
 0.638
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
0.622
tradd
Tnfrsf1a-associated via death domain.
   
 0.619
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.588
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.588
ect2
Epithelial cell transforming 2.
   
 
 0.573
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
   
 0.542
LOC107090723
Ubiquitin-conjugating enzyme E2 variant 1.
    
 0.536
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.