STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nfkbieNuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon. (343 aa)    
Predicted Functional Partners:
LOC107086576
Protein kinase domain-containing protein.
    
 0.965
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.965
rela
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 0.964
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.958
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
  
  
0.918
nfkb1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
     
0.917
LOC107093789
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.917
LOC107095483
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
  
  
 
0.915
REL
REL proto-oncogene, NF-kB subunit.
   
 0.683
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.656
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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