STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107095707-2Heat shock 10 protein 1; Belongs to the GroES chaperonin family. (99 aa)    
Predicted Functional Partners:
hspd1
Heat shock 60 protein 1; Belongs to the chaperonin (HSP60) family.
 
 
 0.999
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.980
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.925
clpp
ATP-dependent Clp protease proteolytic subunit.
 
 
 0.912
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
 
 0.907
mrpl12
Mitochondrial ribosomal protein L12.
   
  
 0.887
tcp1
T-complex 1.
  
 
 0.881
cct6a
Chaperonin containing TCP1, subunit 6A (zeta 1).
  
 
 0.858
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
  
 
 0.858
cct7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
  
 
 0.858
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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