STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Myo1hMyosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (236 aa)    
Predicted Functional Partners:
ENSCVAP00000017501
Uncharacterized protein.
 
      0.783
ENSCVAP00000009907
Uncharacterized protein.
 
      0.689
ENSCVAP00000010321
Myosin_tail_1 domain-containing protein.
 
  
  0.590
ENSCVAP00000002551
TH1 domain-containing protein.
 
      0.545
LOC107097407
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
  
  0.544
ENSCVAP00000015931
Myosin_tail_1 domain-containing protein.
 
  
  0.543
ush1c
Usher syndrome 1C.
   
 0.540
LOC107093413
Myosin_tail_1 domain-containing protein.
 
  
  0.540
ENSCVAP00000029896
Myosin_tail_1 domain-containing protein.
 
  
  0.531
LOC107102270
Whirlin b.
    
 0.495
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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