STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec11aSignal peptidase complex catalytic subunit SEC11. (179 aa)    
Predicted Functional Partners:
spcs2
Signal peptidase complex subunit 2.
   
 0.986
spcs1
Signal peptidase complex subunit 1.
   
 0.979
spcs3
Signal peptidase complex subunit 3.
   
 0.978
kptn
Kaptin (actin binding protein).
    
 0.808
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.792
wdr24
WD repeat domain 24.
    
 0.731
wdr59
WD repeat domain 59.
    
 0.724
nprl2
NPR2 like, GATOR1 complex subunit.
   
 0.719
LOC107089987
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.706
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.706
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.