STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107086570SCY domain-containing protein. (135 aa)    
Predicted Functional Partners:
CXCR3
C-X-C motif chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.
     
  0.909
LOC107100216
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
  0.909
ENSCVAP00000006202
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
  0.900
LOC107100215
Chemokine (C-X-C motif) receptor 3, tandem duplicate 2; Belongs to the G-protein coupled receptor 1 family.
     
  0.900
LOC107100210
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
  0.900
LOC107101001
Uncharacterized protein.
  
     0.461
sall2
Si:ch211-212k18.5.
  
     0.459
ENSCVAP00000009601
SCY domain-containing protein.
  
     0.439
LOC107088804
Si:dkeyp-69b9.6.
  
     0.430
LOC107097809
Uncharacterized protein.
  
     0.416
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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