STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cenpvCentromere protein V. (127 aa)    
Predicted Functional Partners:
sord
Sorbitol dehydrogenase.
   
 
 0.883
LOC107095812
Zgc:77938.
    
 0.705
LOC107085779
PKS_ER domain-containing protein.
    
 0.705
LOC107095807
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.705
LOC107085778
Uncharacterized protein.
    
 0.705
LOC107085782
Uncharacterized protein.
    
 0.705
cdca3
Si:ch211-69g19.2.
      
 0.623
cenpq
Uncharacterized protein.
      
 0.613
ccdc181
Coiled-coil domain containing 181.
      
 0.491
ENSCVAP00000027264
Zebrafish testis-expressed 38.
      
 0.406
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.