STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107100325PPP1R35_C domain-containing protein. (265 aa)    
Predicted Functional Partners:
ENSCVAP00000014004
Uncharacterized protein.
      
 0.672
bahd1
Bromo adjacent homology domain containing 1.
      
 0.672
ENSCVAP00000029077
Uncharacterized protein.
      
 0.672
rttn
Rotatin.
      
 0.662
Tatdn2
Uncharacterized protein.
      
 0.641
stil
Uncharacterized protein.
      
 0.577
fndc3b
Fibronectin type III domain containing 3Ba.
      
 0.495
LOC107097359
BAH domain-containing protein.
      
 0.481
Ccdc9
Coiled-coil domain containing 9.
      
 0.478
arl13b
ADP-ribosylation factor-like 13b.
      
 0.455
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.