gabarap protein (Cyprinodon variegatus) - STRING interaction network

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Predicted Interactions

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Score

gabarap

GABA(A) receptor-associated protein b. (122 aa)

Predicted Functional Partners:

nbr1

0.999

atg3

0.996

atg12

0.984

atg5

0.983

atg4d

0.980

atg4c

0.980

LOC107087654

0.980

atg16l1

0.977

becn1

0.976

sqstm1

0.975

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107087654	atg12	ENSCVAP00000023558	ENSCVAP00000000340	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	0.476
LOC107087654	atg16l1	ENSCVAP00000023558	ENSCVAP00000014390	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	ATG16 autophagy related 16-like 1 (S. cerevisiae).	0.434
LOC107087654	atg3	ENSCVAP00000023558	ENSCVAP00000018418	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Autophagy-related protein 3.	0.624
LOC107087654	atg4c	ENSCVAP00000023558	ENSCVAP00000010886	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.904
LOC107087654	atg4d	ENSCVAP00000023558	ENSCVAP00000001988	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.903
LOC107087654	atg5	ENSCVAP00000023558	ENSCVAP00000016194	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.460
LOC107087654	becn1	ENSCVAP00000023558	ENSCVAP00000018090	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	Beclin 1, autophagy related.	0.463
LOC107087654	gabarap	ENSCVAP00000023558	ENSCVAP00000002860	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	GABA(A) receptor-associated protein b.	0.980
LOC107087654	nbr1	ENSCVAP00000023558	ENSCVAP00000023170	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	NBR1 autophagy cargo receptor a.	0.494
atg12	LOC107087654	ENSCVAP00000000340	ENSCVAP00000023558	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.476
atg12	atg16l1	ENSCVAP00000000340	ENSCVAP00000014390	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	ATG16 autophagy related 16-like 1 (S. cerevisiae).	0.999
atg12	atg3	ENSCVAP00000000340	ENSCVAP00000018418	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Autophagy-related protein 3.	0.999
atg12	atg4c	ENSCVAP00000000340	ENSCVAP00000010886	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.476
atg12	atg4d	ENSCVAP00000000340	ENSCVAP00000001988	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.476
atg12	atg5	ENSCVAP00000000340	ENSCVAP00000016194	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.999
atg12	becn1	ENSCVAP00000000340	ENSCVAP00000018090	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Beclin 1, autophagy related.	0.914
atg12	gabarap	ENSCVAP00000000340	ENSCVAP00000002860	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	GABA(A) receptor-associated protein b.	0.984
atg12	nbr1	ENSCVAP00000000340	ENSCVAP00000023170	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	NBR1 autophagy cargo receptor a.	0.825
atg12	sqstm1	ENSCVAP00000000340	ENSCVAP00000022201	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.	Sequestosome 1.	0.863
atg16l1	LOC107087654	ENSCVAP00000014390	ENSCVAP00000023558	ATG16 autophagy related 16-like 1 (S. cerevisiae).	Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.	0.434