STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107103267Glutamine synthetase. (371 aa)    
Predicted Functional Partners:
glud1
Glutamate dehydrogenase 1a; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.966
Ppat
Amidophosphoribosyltransferase.
    
 0.962
Cad
CPSase_sm_chain domain-containing protein.
  
 
 0.960
cps1
Carbamoyl-phosphate synthase 1, mitochondrial.
  
 
 0.960
gfpt1
Glutamine--fructose-6-phosphate transaminase 1.
  
 
 0.956
LOC107102107
Glutamine-fructose-6-phosphate transaminase 2.
  
 
 0.956
gls
Glutaminase a.
    
 0.952
LOC107103241
ANK_REP_REGION domain-containing protein.
    
 0.952
LOC107094826
Glutaminase 2a (liver, mitochondrial).
    
 0.952
LOC107089987
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
    
 0.937
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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