STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107086576Protein kinase domain-containing protein. (740 aa)    
Predicted Functional Partners:
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
    
 0.987
LOC107095483
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
    
 0.987
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.980
LOC107093789
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.977
LOC107084720
Mitogen-activated protein kinase kinase kinase 14a.
   
0.977
LOC107093973
ADP-ribosylation factor 2b.
   
0.977
LOC107097523
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
0.977
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.971
nfkb1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
   
 0.969
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.969
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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