STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR77WD repeat domain 77. (335 aa)    
Predicted Functional Partners:
prmt5
Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.999
clns1a
Chloride channel, nucleotide-sensitive, 1A.
   
 0.983
LOC107093479
FIP1 like 1b (S. cerevisiae).
   
 0.978
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.974
ENSCVAP00000028190
Symplekin.
    
 0.974
papolg
Poly(A) polymerase gamma.
   
 0.972
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
   
 0.958
riok1
RIO kinase 1 (yeast).
   
 
 0.937
LOC107086420
Uncharacterized protein.
   
 
 0.933
cstf2
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
    
 0.932
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.