STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000003029Si:dkey-148a17.5; Belongs to the G-protein coupled receptor 1 family. (332 aa)    
Predicted Functional Partners:
gria4
Glutamate receptor, ionotropic, AMPA 4a.
    
 0.670
LOC107087909
Glutamate receptor, metabotropic 5a.
     
 0.650
LOC107088936
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
0.646
ENSCVAP00000015188
Glutamate receptor, metabotropic 5b.
     
 0.546
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
      
 0.512
LOC107099623
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
  0.423
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.410
syk
Tyrosine-protein kinase.
     
 0.406
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.