STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000003059Tudor domain containing 12. (737 aa)    
Predicted Functional Partners:
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.832
ebna1bp2
EBNA1 binding protein 2.
   
 0.763
LOC107087339-2
NOP58 ribonucleoprotein homolog (yeast).
  
 
 0.738
mtrex
Mtr4 exosome RNA helicase.
   
 0.718
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
    
 0.706
sf3b1
Splicing factor 3b, subunit 1.
   
 0.704
LOC107087339
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.703
gnl3l
Guanine nucleotide binding protein-like 3 (nucleolar)-like.
  
 0.699
gnl3
Guanine nucleotide binding protein-like 3 (nucleolar).
  
 0.699
ENSCVAP00000007305
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
    
 0.674
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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