STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
marcksMyristoylated alanine-rich protein kinase C substrate a. (251 aa)    
Predicted Functional Partners:
basp1
Brain abundant, membrane attached signal protein 1.
   
 0.658
Gcnt3
Glucosaminyl (N-acetyl) transferase 3, mucin type.
    
 0.654
calm1
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.606
LOC107084023
Calmodulin.
    
 0.606
LOC107094827
Calmodulin.
    
 0.606
LOC107094180
Calmodulin.
    
 0.606
SPDEF
SAM pointed domain containing ETS transcription factor.
      
 0.547
LOC107095034
Upper zone of growth plate and cartilage matrix associated b.
      
 0.512
LOC107100308
Protein kinase C.
    
 0.502
ENSCVAP00000008889
Phorbol-ester/DAG-type domain-containing protein.
    
 0.502
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.