rrn3 protein (Cyprinodon variegatus) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

rrn3

RRN3 homolog, RNA polymerase I transcription factor. (603 aa)

Predicted Functional Partners:

twistnb

0.999

polr1b

0.998

polr1a

0.998

polr1e

0.995

znrd1

0.988

LOC107082378

0.986

POLR2E

0.981

cd3eap

0.980

polr2f

0.977

polr1c

0.972

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107082378	POLR2E	ENSCVAP00000030173	ENSCVAP00000016892	RNA polymerase I and III subunit D.	RNA polymerase II subunit E.	0.999
LOC107082378	cd3eap	ENSCVAP00000030173	ENSCVAP00000011736	RNA polymerase I and III subunit D.	CD3e molecule, epsilon associated protein.	0.998
LOC107082378	polr1a	ENSCVAP00000030173	ENSCVAP00000017722	RNA polymerase I and III subunit D.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
LOC107082378	polr1b	ENSCVAP00000030173	ENSCVAP00000004502	RNA polymerase I and III subunit D.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
LOC107082378	polr1c	ENSCVAP00000030173	ENSCVAP00000004376	RNA polymerase I and III subunit D.	RNA polymerase I and III subunit C.	0.989
LOC107082378	polr1e	ENSCVAP00000030173	ENSCVAP00000030904	RNA polymerase I and III subunit D.	RNA polymerase I subunit E.	0.992
LOC107082378	polr2f	ENSCVAP00000030173	ENSCVAP00000008607	RNA polymerase I and III subunit D.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.999
LOC107082378	rrn3	ENSCVAP00000030173	ENSCVAP00000003089	RNA polymerase I and III subunit D.	RRN3 homolog, RNA polymerase I transcription factor.	0.986
LOC107082378	twistnb	ENSCVAP00000030173	ENSCVAP00000011966	RNA polymerase I and III subunit D.	TWIST neighbor.	0.999
LOC107082378	znrd1	ENSCVAP00000030173	ENSCVAP00000002719	RNA polymerase I and III subunit D.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
POLR2E	LOC107082378	ENSCVAP00000016892	ENSCVAP00000030173	RNA polymerase II subunit E.	RNA polymerase I and III subunit D.	0.999
POLR2E	cd3eap	ENSCVAP00000016892	ENSCVAP00000011736	RNA polymerase II subunit E.	CD3e molecule, epsilon associated protein.	0.996
POLR2E	polr1a	ENSCVAP00000016892	ENSCVAP00000017722	RNA polymerase II subunit E.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
POLR2E	polr1b	ENSCVAP00000016892	ENSCVAP00000004502	RNA polymerase II subunit E.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
POLR2E	polr1c	ENSCVAP00000016892	ENSCVAP00000004376	RNA polymerase II subunit E.	RNA polymerase I and III subunit C.	0.989
POLR2E	polr1e	ENSCVAP00000016892	ENSCVAP00000030904	RNA polymerase II subunit E.	RNA polymerase I subunit E.	0.999
POLR2E	polr2f	ENSCVAP00000016892	ENSCVAP00000008607	RNA polymerase II subunit E.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.999
POLR2E	rrn3	ENSCVAP00000016892	ENSCVAP00000003089	RNA polymerase II subunit E.	RRN3 homolog, RNA polymerase I transcription factor.	0.981
POLR2E	twistnb	ENSCVAP00000016892	ENSCVAP00000011966	RNA polymerase II subunit E.	TWIST neighbor.	0.999
POLR2E	znrd1	ENSCVAP00000016892	ENSCVAP00000002719	RNA polymerase II subunit E.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999