STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hsf2bpHeat shock transcription factor 2 binding protein. (257 aa)    
Predicted Functional Partners:
ENSCVAP00000010146
Tower domain-containing protein.
    
 
 0.897
pnmt
Uncharacterized protein.
      
 0.672
Pnmt
Uncharacterized protein.
      
 0.672
ENSCVAP00000027206
Uncharacterized protein.
      
 0.645
rpa3
Replication protein A3.
      
 0.616
tmem183a
Transmembrane protein 183A.
      
 0.604
CLSPN
Claspin.
      
 0.593
haus8
Uncharacterized protein.
      
 0.593
ENSCVAP00000026025
Synaptonemal complex central element protein 2.
      
 0.589
palb2
PALB2_WD40 domain-containing protein.
    
 
 0.559
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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