prpf40a protein (Cyprinodon variegatus) - STRING interaction network

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[Homology]

Score

prpf40a

PRP40 pre-mRNA processing factor 40 homolog A. (855 aa)

Predicted Functional Partners:

rbm25

0.918

LOC107103205

0.918

ccar1

0.847

sf1

0.837

LOC107103540

0.767

LOC107097557

0.767

Srrm1

0.764

htt

0.762

sf3a1

0.755

TCERG1

0.752

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107097557	LOC107103205	ENSCVAP00000013481	ENSCVAP00000022683	RNA binding motif protein 39b.	RNA binding motif protein 25a.	0.827
LOC107097557	Srrm1	ENSCVAP00000013481	ENSCVAP00000016454	RNA binding motif protein 39b.	PWI domain-containing protein.	0.716
LOC107097557	TCERG1	ENSCVAP00000013481	ENSCVAP00000011461	RNA binding motif protein 39b.	Transcription elongation regulator 1.	0.612
LOC107097557	ccar1	ENSCVAP00000013481	ENSCVAP00000011672	RNA binding motif protein 39b.	Cell division cycle and apoptosis regulator 1.	0.575
LOC107097557	prpf40a	ENSCVAP00000013481	ENSCVAP00000003108	RNA binding motif protein 39b.	PRP40 pre-mRNA processing factor 40 homolog A.	0.767
LOC107097557	rbm25	ENSCVAP00000013481	ENSCVAP00000002360	RNA binding motif protein 39b.	RNA binding motif protein 25b.	0.827
LOC107097557	sf1	ENSCVAP00000013481	ENSCVAP00000020351	RNA binding motif protein 39b.	Splicing factor 1.	0.736
LOC107103205	LOC107097557	ENSCVAP00000022683	ENSCVAP00000013481	RNA binding motif protein 25a.	RNA binding motif protein 39b.	0.827
LOC107103205	LOC107103540	ENSCVAP00000022683	ENSCVAP00000012023	RNA binding motif protein 25a.	Uncharacterized protein.	0.827
LOC107103205	Srrm1	ENSCVAP00000022683	ENSCVAP00000016454	RNA binding motif protein 25a.	PWI domain-containing protein.	0.927
LOC107103205	TCERG1	ENSCVAP00000022683	ENSCVAP00000011461	RNA binding motif protein 25a.	Transcription elongation regulator 1.	0.808
LOC107103205	ccar1	ENSCVAP00000022683	ENSCVAP00000011672	RNA binding motif protein 25a.	Cell division cycle and apoptosis regulator 1.	0.558
LOC107103205	prpf40a	ENSCVAP00000022683	ENSCVAP00000003108	RNA binding motif protein 25a.	PRP40 pre-mRNA processing factor 40 homolog A.	0.918
LOC107103205	rbm25	ENSCVAP00000022683	ENSCVAP00000002360	RNA binding motif protein 25a.	RNA binding motif protein 25b.	0.901
LOC107103205	sf1	ENSCVAP00000022683	ENSCVAP00000020351	RNA binding motif protein 25a.	Splicing factor 1.	0.826
LOC107103205	sf3a1	ENSCVAP00000022683	ENSCVAP00000003352	RNA binding motif protein 25a.	Splicing factor 3a, subunit 1.	0.677
LOC107103540	LOC107103205	ENSCVAP00000012023	ENSCVAP00000022683	Uncharacterized protein.	RNA binding motif protein 25a.	0.827
LOC107103540	Srrm1	ENSCVAP00000012023	ENSCVAP00000016454	Uncharacterized protein.	PWI domain-containing protein.	0.716
LOC107103540	TCERG1	ENSCVAP00000012023	ENSCVAP00000011461	Uncharacterized protein.	Transcription elongation regulator 1.	0.612
LOC107103540	ccar1	ENSCVAP00000012023	ENSCVAP00000011672	Uncharacterized protein.	Cell division cycle and apoptosis regulator 1.	0.575