STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
styxSerine/threonine/tyrosine interacting protein. (218 aa)    
Predicted Functional Partners:
faxdc2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
      
 0.631
txndc16
Thioredoxin domain containing 16.
     
 0.587
ddhd1
DDHD domain containing 1a.
   
  
 0.557
gnpnat1
Glucosamine 6-phosphate N-acetyltransferase.
      
 0.555
shoc2
SHOC2 leucine rich repeat scaffold protein.
   
 
 0.525
rtraf
RNA transcription, translation and transport factor.
      
 0.485
psmc6
Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.
     
 0.453
gak
Cyclin G associated kinase.
    
 0.407
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.