STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000003166Uncharacterized protein. (73 aa)    
Predicted Functional Partners:
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
 0.786
orc2
Origin recognition complex, subunit 2.
   
 0.767
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.713
mcm3
DNA helicase; Belongs to the MCM family.
   
 0.702
cdc20
Cell division cycle 20 homolog.
   
 0.702
anapc1
Anaphase promoting complex subunit 1.
    
 0.702
intu
Inturned planar cell polarity protein.
   
 0.702
LOC107082631
Fizzy/cell division cycle 20 related 1b.
   
 0.702
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 0.702
cdc27
Cell division cycle 27.
    
 0.693
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (38%) [HD]