STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107090555Si:dkey-266m15.5. (241 aa)    
Predicted Functional Partners:
lats2
Large tumor suppressor kinase 2.
    
 0.855
lats1
Large tumor suppressor kinase 1.
    
 0.855
LOC107100240
Uncharacterized protein.
   
 0.841
stk3
Serine/threonine kinase 3 (STE20 homolog, yeast).
   
 0.841
sav1
Salvador family WW domain containing protein 1.
    
 0.768
stk38
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.766
stk38l
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.766
yap1
Yes-associated protein 1.
    
 0.719
LOC107086445
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.590
LOC107086836
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.590
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.