Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
agaAspartylglucosaminidase. (338 aa)    
Predicted Functional Partners:
gba2
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
      
 0.609
ENSCVAP00000028845
Uncharacterized protein.
      
 0.579
dnai2
Dynein, axonemal, intermediate chain 2b.
      
 0.572
nsun5
NOP2/Sun RNA methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.565
LOC107081909
Sialidase 4.
    
 
 0.559
galc
Galactosylceramidase b.
      
 0.552
naglu
N-acetylglucosaminidase, alpha.
   
  
 0.549
lamp1
Lysosomal associated membrane protein 1a.
      
 0.545
tcea1
Transcription elongation factor A (SII), 1.
     
 0.545
gnpnat1
Glucosamine 6-phosphate N-acetyltransferase.
      
 0.541
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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