STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107103247Protein kinase domain-containing protein. (648 aa)    
Predicted Functional Partners:
calm1
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.774
LOC107084023
Calmodulin.
   
 0.774
LOC107094827
Calmodulin.
   
 0.774
LOC107094180
Calmodulin.
   
 0.774
LOC107096604
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
0.742
LOC107097915
Glutamate receptor, ionotropic, N-methyl D-aspartate 1b.
   
 0.644
LOC107102417
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 0.644
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.636
LOC107084483
Uncharacterized protein.
    
 0.635
LOC107095553
Regulating synaptic membrane exocytosis protein 2 isoform X1.
    
 0.633
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.