STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000003264ATP-binding cassette, sub-family C (CFTR/MRP), member 9. (1391 aa)    
Predicted Functional Partners:
ENSCVAP00000022019
IRK domain-containing protein.
   
 0.961
Kcnj11
Potassium inwardly-rectifying channel, subfamily J, member 11.
 
 
 0.929
rapgef4
Zgc:171558.
    
 0.647
LOC107085744
Rap guanine nucleotide exchange factor (GEF) 4.
    
 0.647
LOC107091899
Rap guanine nucleotide exchange factor (GEF) 3.
    
 0.637
pln
Si:ch211-270g19.5.
      
 0.627
LOC107103515
Potassium inwardly-rectifying channel, subfamily J, member 11, like.
 
 
 0.601
ENSCVAP00000001543
Katanin p60 subunit A-like 2.
  
 0.568
gopc
Golgi-associated PDZ and coiled-coil motif containing.
   
 0.502
usp10
Ubiquitin carboxyl-terminal hydrolase.
    
  0.478
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.