STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107100306Voltage-dependent calcium channel gamma-7 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization. Shows specificity only for GRIA1 and GRIA2. Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (341 aa)    
Predicted Functional Partners:
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.793
LOC107082804
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.793
LOC107094299
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.793
LOC107096949
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.793
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.793
LOC107085894
Serine/threonine-protein phosphatase.
   
 0.718
LOC107084657
Serine/threonine-protein phosphatase.
   
 0.718
LOC107103396
Calcium/calmodulin-dependent protein kinase II alpha; Belongs to the protein kinase superfamily.
    
  0.690
ENSCVAP00000026587
Protein kinase domain-containing protein.
    
  0.690
LOC107103577
CaMKII_AD domain-containing protein.
    
  0.690
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.