STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107098426Neuronal cell adhesion molecule a. (1133 aa)    
Predicted Functional Partners:
LOC107105219
Contactin 2.
   
0.677
ptprg
Carbonic anhydrase XVI b.
    
 0.572
ENSCVAP00000024411
Uncharacterized protein.
    
 0.572
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.570
LOC107099944
Syndecan binding protein (syntenin) 2.
     
 0.487
cntn5
Contactin 5.
    
0.485
ENSCVAP00000001288
Uncharacterized protein.
    
0.485
ENSCVAP00000001302
Uncharacterized protein.
    
0.485
LOC107098421
Contactin 1b.
    
0.485
LOC107101345
Ig-like domain-containing protein.
    
0.485
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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