STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnnm3Uncharacterized protein. (772 aa)    
Predicted Functional Partners:
gmps
Guanine monophosphate synthase.
  
 
 0.669
LOC107085109
Solute carrier family 41 member 1.
      
 0.665
LOC107092015
Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
  
  
 0.636
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.569
nt5e
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
    
 0.555
PTP4A3
Protein tyrosine phosphatase 4A3.
    
 
 0.532
LOC107094887
Solute carrier family 34 member 2b.
     
 0.524
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
    
 
 0.503
ENSCVAP00000002659
Ion_trans domain-containing protein.
    
 
 0.489
ENSCVAP00000021642
LSDAT_euk domain-containing protein.
    
 
 0.489
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.