STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107097969RIB43A domain with coiled-coils 2. (306 aa)    
Predicted Functional Partners:
tekt2
Tektin 2 (testicular).
   
 
 0.752
tekt3
Tektin 3.
   
 
 0.737
armc4
Armadillo repeat containing 4.
   
 
 0.699
Efhc1
Uncharacterized protein.
   
 
 0.693
ENSCVAP00000001965
Protein kinase domain-containing protein.
    
 0.685
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.685
ENSCVAP00000021138
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.685
mns1
Meiosis-specific nuclear structural 1.
    
 0.683
ENSCVAP00000002985
Uncharacterized protein.
    
 
 0.668
Efhc2
Uncharacterized protein.
   
 
 0.658
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.