STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dennd2bSuppression of tumorigenicity 5. (1135 aa)    
Predicted Functional Partners:
RASSF10-2
Ras association domain family member 10.
      
 0.672
LOC107091770
Si:dkey-16l2.16.
    
 0.614
ift27
Intraflagellar transport 27 homolog (Chlamydomonas).
    
 0.614
rab35
RAB35, member RAS oncogene family b.
    
 0.614
Suox
Sulfite oxidase.
      
 0.556
hcfc2
Host cell factor C2.
      
 0.509
LOC107089019
RAB9B, member RAS oncogene family.
     
 0.458
LOC107103394
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
   
 
  0.456
rras2
RAS related 2.
      
 0.402
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.