STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000003402Apelin receptor a; Belongs to the G-protein coupled receptor 1 family. (362 aa)    
Predicted Functional Partners:
apln
Uncharacterized protein.
   
 
 0.986
LOC107092670
Apelin receptor b; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.906
apela
Uncharacterized protein.
    
 
 0.876
LOC107089355
WD_REPEATS_REGION domain-containing protein.
    
  0.819
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
  0.819
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
  0.819
gnb2
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
  0.819
LOC107087493
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
    
 0.792
LOC107096879
Guanine nucleotide binding protein (G protein), beta 5a.
    
  0.783
gnb3
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
    
  0.783
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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