STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107100299Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1. (724 aa)    
Predicted Functional Partners:
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
   
 0.987
stip1
Stress-induced phosphoprotein 1.
   
 0.955
LOC107091989
Receptor-interacting serine-threonine kinase 3.
    
 0.948
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
  
  
 
0.934
mos
V-mos Moloney murine sarcoma viral oncogene homolog; Belongs to the protein kinase superfamily.
    
 0.924
LOC107089266
Uncharacterized protein.
    
  0.910
LOC107100300
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
  
  
 
0.900
ppp5c
Serine/threonine-protein phosphatase.
   
 0.881
LOC107101922
Peptidylprolyl isomerase.
   
 0.878
ptges3
Prostaglandin E synthase 3b (cytosolic).
   
 0.871
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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