STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107103814Arachidonate 12-lipoxygenase. (670 aa)    
Predicted Functional Partners:
ENSCVAP00000013489
PLAT domain-containing protein.
   
 
 
0.934
LOC107085496
Uncharacterized protein.
    
 0.917
LOC107102428
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.916
LOC107098100
EGF-like domain-containing protein.
   
 
 0.913
LOC107088990
Prostaglandin-endoperoxide synthase 1.
   
 
 0.913
ptgs2
Prostaglandin-endoperoxide synthase 2b.
   
 
 0.913
LOC107102418
PLA2c domain-containing protein.
     
 0.908
LOC107097125
Phospholipase A2, group XIIB.
    
  0.905
pla2g12a
Phospholipase A2, group XIIA.
    
  0.905
LOC107097128
Uncharacterized protein.
    
  0.905
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.