STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc45a2Solute carrier family 45 member 2. (589 aa)    
Predicted Functional Partners:
TYR
Tyrosinase.
   
  
 0.687
LOC107098484
Tetraspanin.
      
 0.671
LOC107083471
Somatolactin alpha.
      
 0.669
oca2
Oculocutaneous albinism II.
      
 0.643
psmb2
Proteasome subunit beta.
   
  
 0.587
LOC107093352
Forkhead box D1.
    
 
 0.576
pmel
Premelanosome protein a.
   
  
 0.565
ENSCVAP00000028324
Forkhead box L1.
    
 
 0.555
slc24a5
Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.554
spr
Sepiapterin reductase b.
   
  
 0.553
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.