STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glaAlpha-galactosidase. (420 aa)    
Predicted Functional Partners:
glb1
Galactosidase, beta 1; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.954
glb1l
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.954
hexb
Beta-hexosaminidase.
  
 
 0.949
hexa
Beta-hexosaminidase.
  
 
 0.947
galc
Galactosylceramidase b.
     
 0.923
arsa
Arylsulfatase A.
   
 
 0.921
neu1
Neuraminidase 1.
     
 0.918
Gaa
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.916
LOC107097057
Si:ch73-12o23.1; Belongs to the glycosyl hydrolase 31 family.
     
 0.916
Lct
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
     
 0.915
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.