STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107089413FERM domain-containing protein. (297 aa)    
Predicted Functional Partners:
gpr143
G protein-coupled receptor 143.
      
 0.622
nrp1
Neuropilin; Belongs to the neuropilin family.
     
 0.528
slc25a43
Solute carrier family 25 member 43; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.522
mst1r
Macrophage stimulating 1 receptor b.
    
 0.507
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.507
LOC107097508
Macrophage stimulating 1 receptor a.
    
 0.507
Frmpd2
Uncharacterized protein.
 
      0.493
LOC107091514
Rho GTPase activating protein 36.
      
 0.489
ENSCVAP00000026124
Uncharacterized protein.
      
 0.487
hps5
Hermansky-Pudlak syndrome 5 protein homolog; May regulate the synthesis and function of lysosomes and of highly specialized organelles, such as melanosomes and platelet dense granules.
      
 0.477
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.