STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107083391Angiomotin like 2b. (689 aa)    
Predicted Functional Partners:
LOC107091747
Neurofibromin 2b (merlin).
    
 0.943
nf2
Neurofibromin 2a (merlin).
    
 0.943
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
   
 0.916
LOC107089879
Angiomotin.
    
0.913
LOC107092836
Rho GTPase activating protein 17b.
    
 0.909
LOC107086260
Rho GTPase activating protein 17.
    
 0.909
prkcz
Protein kinase C, zeta.
    
  0.905
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
  0.905
amotl2
Angiomotin like 2a.
  
  
 
0.902
yap1
Yes-associated protein 1.
   
 0.808
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.