STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000003574Uncharacterized protein. (244 aa)    
Predicted Functional Partners:
Ttn
Uncharacterized protein.
 
     
0.897
ENSCVAP00000018997
Uncharacterized protein.
 
      0.894
ENSCVAP00000032315
Uncharacterized protein.
 
     
0.892
ENSCVAP00000008319
Fibronectin type-III domain-containing protein.
 
      0.884
ENSCVAP00000018823
Uncharacterized protein.
 
      0.880
ENSCVAP00000032268
Uncharacterized protein.
 
      0.844
ENSCVAP00000008246
Uncharacterized protein.
 
     
0.809
ENSCVAP00000008272
Uncharacterized protein.
 
      0.721
wdr18
WD repeat domain 18.
   
 0.599
tex10
Testis expressed 10.
   
 0.571
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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