STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107084894Neutrophil cytosolic factor 2. (493 aa)    
Predicted Functional Partners:
ncf4
Neutrophil cytosolic factor 4.
   
 0.978
ncf1
Neutrophil cytosolic factor 1.
   
 0.965
ENSCVAP00000017368
Cytochrome b-245, alpha polypeptide.
   
 0.836
LOC107096819
Cytochrome b-245, beta polypeptide (chronic granulomatous disease).
   
 0.820
nox1
NADPH oxidase 1.
   
 0.798
LOC107087399
Dual oxidase.
   
 0.747
noxo1
NADPH oxidase organizer 1a.
   
 0.744
LOC107086248
NADPH oxidase organizer 1b.
   
 0.744
rac2
Uncharacterized protein.
   
 0.738
LOC107092536
Rac family small GTPase 1b.
   
 0.738
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.