STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdan1Codanin 1. (1162 aa)    
Predicted Functional Partners:
asf1b
Anti-silencing function 1B histone chaperone.
    
 
 0.634
LOC107100137
Anti-silencing function 1Ba histone chaperone.
    
 
 0.634
LOC107094438
Zgc:154061.
    
 
 0.629
ENSCVAP00000030503
Uncharacterized protein.
   
    0.595
zwilch
Zwilch kinetochore protein.
      
 0.576
wdfy3
WD repeat and FYVE domain containing 3.
      
 0.576
ipo4
Importin 4.
    
 
 0.491
LOC107089837
Interleukin 13 receptor, alpha 2.
      
 0.480
strc
Stereocilin 1.
    
 
 0.452
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.