STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps18bMitochondrial ribosomal protein S18B. (251 aa)    
Predicted Functional Partners:
mrps22
Mitochondrial ribosomal protein S22.
   
 0.995
dap3
Death associated protein 3.
   
 0.991
mrps27
Mitochondrial ribosomal protein S27.
   
 0.989
mrps31
Mitochondrial ribosomal protein S31.
   
 0.987
mrps33
Mitochondrial ribosomal protein S33.
   
 0.986
mrps26
Mitochondrial ribosomal protein S26.
   
 0.982
mrps18c
Mitochondrial ribosomal protein S18C; Belongs to the bacterial ribosomal protein bS18 family.
   
0.982
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.980
mrps7
Mitochondrial ribosomal protein S7.
   
 0.977
mrps35
Mitochondrial ribosomal protein S35.
   
 0.977
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.