STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ociad2OCIA domain containing 2. (151 aa)    
Predicted Functional Partners:
LOC107089904
Synaptopodin 2-like a.
      
 0.552
ENSCVAP00000020137
TBC1 domain family, member 30.
      
 0.548
dcun1d4
DCN1-like protein.
      
 0.513
timmdc1
Translocase of inner mitochondrial membrane domain containing 1.
    
 
 0.485
smim14
Small integral membrane protein 14.
      
 0.480
wdfy3
WD repeat and FYVE domain containing 3.
      
 0.463
C18orf32
Chromosome 18 open reading frame 32.
      
 0.453
nrip3
Uncharacterized protein.
      
 0.449
Pdzd2
Uncharacterized protein.
      
 0.410
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.400
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.