STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NR4A1Nuclear receptor subfamily 4 group A member 1. (590 aa)    
Predicted Functional Partners:
mapk7
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.902
LOC107088730
Nuclear receptor subfamily 4, group A, member 1.
  
  
 
0.902
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 
 0.698
LOC107094667
Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family.
      
 0.663
med1
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
     
 0.472
ENSCVAP00000002779
GPS2_interact domain-containing protein.
    
 0.467
Ncor1
Uncharacterized protein.
    
 0.467
ncor2
Nuclear receptor corepressor 2.
    
 0.467
LOC107087716
Selenoprotein J.
    
 0.432
LOC107097672
Uncharacterized protein.
    
 0.432
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.