STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107100289Plexin b1a. (1970 aa)    
Predicted Functional Partners:
SEMA4D
Semaphorin 4D; Belongs to the semaphorin family.
    
0.736
LOC107103193
Semaphorin 4e; Belongs to the semaphorin family.
    
0.722
LOC107095304
Si:ch211-129c21.1; Belongs to the semaphorin family.
    
0.722
ENSCVAP00000012808
Semaphorin 7A; Belongs to the semaphorin family.
    
 0.684
LOC107097502
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.
    
 0.652
LOC107086770
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga; Belongs to the semaphorin family.
    
 0.652
sema5a
Sema domain-containing protein.
    
0.651
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.647
LOC107092226
Sema domain-containing protein.
    
0.606
sema5b
Sema domain-containing protein.
    
0.606
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.