STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekha7Pleckstrin homology domain containing, family A member 7b. (1306 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
 0.614
lats2
Large tumor suppressor kinase 2.
    
 0.551
lats1
Large tumor suppressor kinase 1.
    
 0.551
LOC107104443
Intersectin 2b.
   
  0.522
ENSCVAP00000031587
Uncharacterized protein.
   
  0.522
ENSCVAP00000031602
Uncharacterized protein.
   
  0.522
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.513
ENSCVAP00000002726
Ubiquitin-like domain-containing protein.
    
 0.494
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.494
sav1
Salvador family WW domain containing protein 1.
    
 0.486
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.