STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107087107Acetylserotonin O-methyltransferase 2. (343 aa)    
Predicted Functional Partners:
LOC107104616
N-acetyltransferase domain-containing protein.
   
 
 0.965
aanat
Arylalkylamine N-acetyltransferase 1.
   
 
 0.964
LOC107083117
Arylalkylamine N-acetyltransferase 2.
   
 
 0.948
aldh9a1
Aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1; Belongs to the aldehyde dehydrogenase family.
     
 0.909
LOC107083604
Aldehyde dehydrogenase 9 family, member A1b; Belongs to the aldehyde dehydrogenase family.
     
 0.909
aldh16a1
Aldehyde dehydrogenase 16 family, member A1.
     
 0.909
aldh2
Aldehyde dehydrogenase 2 family member, tandem duplicate 2; Belongs to the aldehyde dehydrogenase family.
     
 0.909
LOC107088618
Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
 0.908
LOC107089910
Cytochrome P450, family 1, subfamily A; Belongs to the cytochrome P450 family.
   
 
 0.908
LOC107091208
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.907
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.