STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107102037Uncharacterized protein. (600 aa)    
Predicted Functional Partners:
bcl6
BCL6A transcription repressor a.
  
  
 
0.902
ENSCVAP00000002779
GPS2_interact domain-containing protein.
    
 0.612
Ncor1
Uncharacterized protein.
    
 0.612
ncor2
Nuclear receptor corepressor 2.
    
 0.612
bcorl1
BCL6 corepressor-like 1.
    
 0.596
ENSCVAP00000010474
ANK_REP_REGION domain-containing protein.
    
 0.596
bcor
BCL6 corepressor.
    
 0.596
neb
Nebulin.
    
  0.593
pbx4
Pre-B-cell leukemia transcription factor 4.
    
 0.507
ENSCVAP00000017169
Pre-B-cell leukemia homeobox 2.
    
 0.498
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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