STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpt2Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family. (667 aa)    
Predicted Functional Partners:
acadvl
Acyl-CoA dehydrogenase very long chain.
   
 0.966
acadl
Acyl-CoA dehydrogenase long chain.
   
 0.954
ENSCVAP00000029853
Acyl-CoA_dh_N domain-containing protein.
   
 0.954
acox3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.943
LOC107097221
Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.923
cpt1a
Carnitine palmitoyltransferase 1Ab (liver); Belongs to the carnitine/choline acetyltransferase family.
  
 
0.923
cpt1b
Carnitine palmitoyltransferase 1B (muscle); Belongs to the carnitine/choline acetyltransferase family.
  
 
0.923
LOC107100949
Carnitine palmitoyltransferase 1Cb; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.922
LOC107103101
Solute carrier family 25 member 20; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.827
acaa2
Acetyl-CoA acyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.742
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.